[galaxy-dev] uploading large datasets into a new instance of Galaxy on a Mac Pro

2013-05-31 Thread Elwood Linney
Hello, I installed Galaxy on a new Mac Pro with 64gb of ram and a solid state first drive and 3 , 2tb normal drives. I can upload from my desktop a smaller file like a reference list or a cuffdiff file but when I try to load a 16gb fastq file it just does not load. Given that I have my files on t

[galaxy-dev] transferring Trapnell et al programs into a one user instance of Galaxy

2013-06-14 Thread Elwood Linney
analysis tools above. Any help will be greatly appreciated. My intention here is remove my contribution to the traffic on the online Galaxy, so some people should consider it a worthy cause Sincerely, Elwood Linney Professor of Molecular Genetics and Microbiology Duke University Medical Cener

[galaxy-dev] simplest way to connect RNAseq tools for a local Galaxy instance

2013-06-20 Thread Elwood Linney
://wiki.galaxyproject.org/Admin/Config/Tool%20Dependencies] under "Local Jobs" I would appreciate any specific advice on this. Sincerely, Elwood Linney DUMC ___ Please keep all replies on the list by using "reply all" in your mail cli