Hello,
When starting Galaxy after updating it we get the assertion errors that
follow the following format:
galaxy.datatypes.registry ERROR 2014-10-14 15:51:40,004 Error loading
display application (./display_applications/ucsc/bam.xml): Filename and id
attributes required for dynamic_links
Traceb
alaxy
page inside the galaxy browser that we already have. Is this due to
misconfiguration that I may have?
Thank you for your time,
--Ricardo Perez
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en running velvet optimizer from the command line (the first command
from above) we get the correct output just fine.
We have re-installed the tools and velvet. It seems like galaxy is passing the
command just fine, but we are getting nothing back to galaxy.
Anyone has ideas on how to fix this p
icz/oasesoptimiser/53e887dda799/oasesoptimiser/oases_optimiser.py",
line 69, in __main__
for line in open(transcript_path):
IOError: [Errno 2] No such file or directory: 'transcripts.fa'
Anyone knows what is the source of this prob
galaxy's can be
updated.
--Ricardo Perez
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FasQC:Read QC, under summary statistics it says that encoding is Sanger
/ Illumina 1.9. Is this an error of our part while installing galaxy in
our server?
Thank you for your time,
--Ricardo Perez
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