Hi Bjoern,
I've upgraded our machine and confirmed it now works fine. Thanks for that!
Shane
On 22/08/2013, at 5:17 AM, Bjoern Gruening wrote:
>
> Hi Shane,
>
> please find a new bismark version with an updated dependency on samtools
> 0.1.19 here:
>
> http://toolshed.g2.bx.psu.edu/view/bg
Hi Shane,
please find a new bismark version with an updated dependency on samtools
0.1.19 here:
http://toolshed.g2.bx.psu.edu/view/bgruening/bismark
Thanks for reporting that issue,
Bjoern
> I've had a bit of a time trying to get Bismark working on our Galaxy
> instance. The install doesn'
Hi Shane,
that is sadly true. Totally forget to migrate the samtools package to
the main toolshed. Will do that week.
Sorry for the inconvenience and thanks for pointing that out!
Bjoern
> I've had a bit of a time trying to get Bismark working on our Galaxy
> instance. The install doesn't work
I've had a bit of a time trying to get Bismark working on our Galaxy instance.
The install doesn't work because of the dependency on samtools 0.1.18 but in
fact it requires samtools 0.1.19. I have a build of that installed as standard
on our system so putting a symlink to that in the place of
