[galaxy-dev] Can't specify workflow parameters for integer values

2013-02-01 Thread Liisa Koski
Hello,
I created a simple workflow with an input file and the 'Select first' 
tool. I wanted the value to be a parameter ${value}. I am able to save the 
workflow and see the little grey parameters box at the top of the workflow 
editor.
When I try to run this workflow I get a yellow box at the top of the 
window stating the following:

Problems were encountered when loading this workflow, likely due to tool 
version changes. Missing parameter values have been replaced with default. 
Please review the parameter values below. 

I do not however see an error in paster.log

When I reopen the workflow in the editor I get a popup window saying 
'Workflow loaded with changes'

Problems were encountered loading this workflow (possibly a result of tool 
upgrades). Please review the following parameters and then save.
Step 2: Select first
Value no longer valid for 'Select first', replaced with default

I am running two instances of Galaxy (Jan. 11 distributuion) and this 
occurs in both of my instances. Will other workflows as well. But it 
appears to only occur for integer parameters...not text parameters.

Any help would be much appreciated.

Liisa
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Re: [galaxy-dev] Can't specify workflow parameters for integer values

2013-02-01 Thread Daniel Blankenberg
Hi Liisa,

Thank you for reporting this bug. A fix has been committed 
(https://bitbucket.org/galaxy/galaxy-central/commits/73bb36c4ee3b34c3ca32ed830b4f91df79b971c5)
 and will be available in an upcoming release. Please let us know if you 
encounter additional issues.


Thanks for using Galaxy,

Dan


On Feb 1, 2013, at 2:59 PM, Liisa Koski wrote:

 Hello, 
 I created a simple workflow with an input file and the 'Select first' tool. I 
 wanted the value to be a parameter ${value}. I am able to save the workflow 
 and see the little grey parameters box at the top of the workflow editor. 
 When I try to run this workflow I get a yellow box at the top of the window 
 stating the following: 
 
 Problems were encountered when loading this workflow, likely due to tool 
 version changes. Missing parameter values have been replaced with default. 
 Please review the parameter values below. 
 
 I do not however see an error in paster.log 
 
 When I reopen the workflow in the editor I get a popup window saying 
 'Workflow loaded with changes' 
 
 Problems were encountered loading this workflow (possibly a result of tool 
 upgrades). Please review the following parameters and then save.
 Step 2: Select first
 Value no longer valid for 'Select first', replaced with default
 
 I am running two instances of Galaxy (Jan. 11 distributuion) and this occurs 
 in both of my instances. Will other workflows as well. But it appears to only 
 occur for integer parameters...not text parameters. 
 
 Any help would be much appreciated. 
 
 Liisa 
 ___
 Please keep all replies on the list by using reply all
 in your mail client.  To manage your subscriptions to this
 and other Galaxy lists, please use the interface at:
 
  http://lists.bx.psu.edu/

___
Please keep all replies on the list by using reply all
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/