Almabrazi
Sent: Thursday, May 30, 2013 4:47 PM
To: Dannon Baker; neil.burd...@csiro.au
Cc: Galaxy Dev
Subject: Re: [galaxy-dev] Getting example_watch_folder.py to work...
Sorry for bringing this back but I am having an issue with the
example_watch_folder.pl script. After running in and put a fasta file
[mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of Dannon Baker
Sent: Thursday, May 09, 2013 6:48 AM
To: neil.burd...@csiro.au
Cc: Galaxy Dev
Subject: Re: [galaxy-dev] Getting example_watch_folder.py to work...
Hey Neil,
A user browsing that history wouldn't automatically get the up
Hey Neil,
A user browsing that history wouldn't automatically get the updates (unless
the history was already refreshing for some reason), but they definitely
would upon refresh. Glad you got the rest working!
-Dannon
On Thu, May 9, 2013 at 2:02 AM, wrote:
> Hi all,
>
> I fina
Hi all,
I finally resolved the issue I'll mention it here to help anyone else
who has the same issue. In "Edit" mode on the workflow you add the "Workflow
control->Inputs" to use the api.
Final question
Everything gets created and stored in the database, but the history column on
Hi,
I'm still struggling to get the example_watch_folder.py to work. So any
help much appreciated.
I've created a simple workflow, which essentially opens a text file and then
writes out the data to a html file.
My xml file:
Test
$__root_dir__/tools/copy/copy.pl
--input_im
It looks like the problem may have to do with the file I am using ???
It is a *.nii.gz file.
Does galaxy try to uncompress ? do something to *.gz files when using the api
(as it tries to do in ~/galaxy-dist/tools/data_source/upload.py
Does anyone know of where in the code I can edit so my mile
Further, it seems that it doesn't manage to get hold of the file specified in
the input directory as I can see from the output:
http://barium-rbh/csiro/api/histories/964b37715ec9bd22/contents/2faba7054d92b2df
{
"data_type": "html",
"deleted": false,
"download_url": "/csiro/datasets/
Hi,
I'm trying to get the example_watch_folder.py to run but it seems to fail,
and I'm not sure why?
I run:
./example_watch_folder.py 64f3209856a3cf4f2d034a1ad5bf851c
http://barium-rbh/csiro/api/ /home/galaxy/galaxy-drop/input
/home/galaxy/galaxy-drop/output "My API Import" f597429621d6e
