Re: [galaxy-dev] Problems with DataImport (fixed)

2012-02-01 Thread Nate Coraor
On Dec 31, 2011, at 6:38 PM, Ted Goldstein wrote: > This bug irritated me, so I fixed it. Essentially add_file() in upload.py > is not in on the joke that local dirs are relative paths and need the > absolute path tacked onto it. > Is there a written process on how to submit the fix? I could

Re: [galaxy-dev] Problems with DataImport (fixed)

2011-12-31 Thread Ted Goldstein
This bug irritated me, so I fixed it. Essentially add_file() in upload.py is not in on the joke that local dirs are relative paths and need the absolute path tacked onto it. Is there a written process on how to submit the fix? I could not find it. Thanks, Ted diff -r 21b645303c02 tools/data

[galaxy-dev] Problems with DataImport

2011-12-29 Thread Ted Goldstein
Hi there, Here are three interrelated issues. I am trying to use Galaxy with some large cancer genomic datasets here at UCSC and do some systems biology.I have petabyte size dataset data libraries which will constantly be in flux at the edges. I would prefer to just have the Galaxy read