Re: [galaxy-dev] Trackster error when loading a gff file

2012-10-23 Thread Jeremy Goecks
The error suggests that Trackster thinks the dataset is in GTF format, not GFF format. Galaxy attempts to guess a format when a file is uploaded. If transcript_id and gene_id are present in the attributes column, Galaxy will assign it a GTF format. (In GTF format, attributes transcript_id and g

[galaxy-dev] Trackster error when loading a gff file

2012-10-23 Thread Yec'han Laizet
Hello, when I try to load a gff file in trackster on a galaxy instance (ubuntu server), I get the following error: Traceback (most recent call last): File "/home/pgtgal/galaxy-dist/lib/galaxy/datatypes/converters/interval_to_fli.py", line 91, in main() File "/home/pgtgal/galaxy-dis