Re: [galaxy-dev] fasta integration in galaxy
My fasta data are now integrated and available, If you encounter the problem, follow the wiki link : https://bitbucket.org/galaxy/galaxy-central/wiki/DataLibraries/UploadingFiles I specify the location path of my data source in the universe_wsgi.ini file : as library_import_dir = /my/data/location and then import my data using the admin UI. Thanks for your answer Jennifer, best regards, Ben ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] fasta integration in galaxy
Hello Jennifer, Thanks for your quick answer, I would like to upload large fasta files and make it available to the user interface for analysis with galaxy tools. I will have a look at the uploading/data librairies wiki page here : https://bitbucket.org/galaxy/galaxy-central/wiki/DataLibraries/UploadingFiles . I 'll give you a feedback. Thanks, greetings, Ben ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] fasta integration in galaxy
Hello Ben, By fasta data, do you mean that you would like to add in local genomes? If so, these wiki pages have instructions: https://bitbucket.org/galaxy/galaxy-central/wiki/DataIntegration https://bitbucket.org/galaxy/galaxy-central/wiki/NGSLocalSetup If instead you want to load large local files to do analysis, this prior mailing list response has the details: http://lists.bx.psu.edu/pipermail/galaxy-user/2011-March/002135.html Please let us know if your question has been misunderstood, Best, Jen Galaxy team On 6/30/11 6:55 AM, B M wrote: Dear All, I have just finished integrating my blast data to my galaxy local instance, and now I would like to add my fasta files. Does anybody know how can I do that ? How should it look in the UI ? Thanks, best regards Ben ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Jennifer Jackson http://usegalaxy.org/ http://galaxyproject.org/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
[galaxy-dev] fasta integration in galaxy
Dear All, I have just finished integrating my blast data to my galaxy local instance, and now I would like to add my fasta files. Does anybody know how can I do that ? How should it look in the UI ? Thanks, best regards Ben ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
