I added an example taken from trim.seqs.xml in the Mothur metagenomics
tool_suite to:
https://bitbucket.org/galaxy/galaxy-central/wiki/ToolConfigSyntax
The following will create datasets in the history panel, setting the output data type to
be the same as that of an input dataset named by
Hi everyone,
I'm facing a little problem ...
I have the following input :
param name=input type=data format=sff,fasta,fastq label=454
reads /
param name=qual_file type=data format=qual optional=true
label=Quality reads file (if input is a fasta) /
and the following output:
data name=output
On Wed, Jun 8, 2011 at 9:26 PM, Jim Johnson johns...@umn.edu wrote:
I added an attribute format_source (analogous to metadata_source)
to the data tag to deal with that kind of issue:
see: https://bitbucket.org/galaxy/galaxy-central/wiki/ToolConfigSyntax
Where is the code to handle this?
It went into galaxy-central:
$ hg log -pr 5082
changeset: 5082:a86e1fa82a89
user:Kanwei Li kan...@gmail.com
date:Thu Feb 17 15:35:07 2011 -0500
summary: Add a format_source attribute to the ToolConfig output data
element [JJ Johnson]. Closes #470
diff -r 885f04ae671e -r
