I had to change the matrix to a one dimensional array:
$ hg diff histogram.py
diff -r ea364eb4375f tools/plotting/histogram.py
--- a/tools/plotting/histogram.py Tue Feb 01 13:35:46 2011 -0500
+++ b/tools/plotting/histogram.py Tue Feb 01 16:05:42 2011 -0600
@@ -69,7 +69,8 @@
On Tue, Feb 01, 2011 at 08:51:25PM +, Peter wrote:
> On Tue, Feb 1, 2011 at 8:06 PM, David Hoover wrote:
> > I just updated to the most recent version of Galaxy (hg pull -u), and now
> > the error is different:
> > An error occurred running this job: Error in hist.default(list(8, 6, 14, 8,
> >
> R gives the error message 'x' must be numeric, so relevant questions
> are what version of R do you have, what version or rpy, and what
> version of Python (since Galaxy's tools tends to invoke R from
> Python via the ryp library - certainly the histogram tool does).
python = 2.6
R = 2.10.0
rpy
On Tue, Feb 1, 2011 at 8:06 PM, David Hoover wrote:
> I just updated to the most recent version of Galaxy (hg pull -u), and now
> the error is different:
> An error occurred running this job: Error in hist.default(list(8, 6, 14, 8,
> 10, 3, 8, 6, 3, 12, 12, 8, 8, :
> 'x' must be numeric
> What giv
I just updated to the most recent version of Galaxy (hg pull -u), and now the
error is different:
An error occurred running this job: Error in hist.default(list(8, 6, 14, 8, 10,
3, 8, 6, 3, 12, 12, 8, 8, :
'x' must be numeric
What gives?
David
On Feb 1, 2011, at 12:28 PM, David Hoover wrote:
I think I have everything installed correctly for the histogram tool. However,
when I try to generate a histogram with a simple tabular file of numbers, I get
the following error message:
An error occurred running this job: array() argument 1 must be char, not list
Any ideas?
David Hoover
Hel
