Re: [galaxy-dev] limited tool shed browse
My apologies. It takes about 10 seconds or more to load the other pages. There is no indication in my browser (Safari) that anything is happening, so I guess the moral is that I am too impatient. David On Feb 22, 2012, at 4:07 PM, Greg Von Kuster wrote: > Hi David, > > I cannot reproduce this behavior from my local Galaxy instance, but clicking > '2', '3', '4' or 'Show All" does take a second or more to display the > response. Can you provide more information about the environment you have or > what you are doing to reproduce this? > > Thanks > > Greg Von Kuster > > On Feb 22, 2012, at 4:02 PM, David Hoover wrote: > >> When I click on Admin->'Search and browse tool sheds'->'Galaxy main tool >> shed', it shows the first page of Valid repositories. However, clicking >> '2', '3', '4', or 'Show All' has no effect. I can only display the first >> page of repositories. >> >> However, if I search for valid tools using the menu under 'Galaxy main tool >> shed', I can get to any of the repositories listed at the Galaxy main >> toolshed. >> >> Is this a bug or a feature? >> >> David Hoover >> Helix Systems Staff >> ___ >> Please keep all replies on the list by using "reply all" >> in your mail client. To manage your subscriptions to this >> and other Galaxy lists, please use the interface at: >> >> http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] limited tool shed browse
What browser / version are you using? On Feb 22, 2012, at 4:18 PM, David Hoover wrote: > It's a local install, hg summary gives 6621:26920e20157f. I'm using MySQL as > a backend database and have the following options set to non-default: > > port = 8081 > host = 0.0.0.0 > tool_config_file = tool_conf.xml,shed_tool_conf.xml > install_tool_config_file = shed_tool_conf.xml > brand = Galaxy1 > use_interactive = False > enable_whoosh_library_search = True > use_remote_user = True > allow_user_deletion = True > allow_user_impersonation = True > allow_user_dataset_purge = True > new_user_dataset_access_role_default_private = True > enable_quotas = True > retry_job_output_collection = 10 > output_size_limit = 10737418240 > start_job_runners = drmaa > > On Feb 22, 2012, at 4:07 PM, Greg Von Kuster wrote: > >> Hi David, >> >> I cannot reproduce this behavior from my local Galaxy instance, but clicking >> '2', '3', '4' or 'Show All" does take a second or more to display the >> response. Can you provide more information about the environment you have >> or what you are doing to reproduce this? >> >> Thanks >> >> Greg Von Kuster >> >> On Feb 22, 2012, at 4:02 PM, David Hoover wrote: >> >>> When I click on Admin->'Search and browse tool sheds'->'Galaxy main tool >>> shed', it shows the first page of Valid repositories. However, clicking >>> '2', '3', '4', or 'Show All' has no effect. I can only display the first >>> page of repositories. >>> >>> However, if I search for valid tools using the menu under 'Galaxy main tool >>> shed', I can get to any of the repositories listed at the Galaxy main >>> toolshed. >>> >>> Is this a bug or a feature? >>> >>> David Hoover >>> Helix Systems Staff >>> ___ >>> Please keep all replies on the list by using "reply all" >>> in your mail client. To manage your subscriptions to this >>> and other Galaxy lists, please use the interface at: >>> >>> http://lists.bx.psu.edu/ > > ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] limited tool shed browse
It's a local install, hg summary gives 6621:26920e20157f. I'm using MySQL as a backend database and have the following options set to non-default: port = 8081 host = 0.0.0.0 tool_config_file = tool_conf.xml,shed_tool_conf.xml install_tool_config_file = shed_tool_conf.xml brand = Galaxy1 use_interactive = False enable_whoosh_library_search = True use_remote_user = True allow_user_deletion = True allow_user_impersonation = True allow_user_dataset_purge = True new_user_dataset_access_role_default_private = True enable_quotas = True retry_job_output_collection = 10 output_size_limit = 10737418240 start_job_runners = drmaa On Feb 22, 2012, at 4:07 PM, Greg Von Kuster wrote: > Hi David, > > I cannot reproduce this behavior from my local Galaxy instance, but clicking > '2', '3', '4' or 'Show All" does take a second or more to display the > response. Can you provide more information about the environment you have or > what you are doing to reproduce this? > > Thanks > > Greg Von Kuster > > On Feb 22, 2012, at 4:02 PM, David Hoover wrote: > >> When I click on Admin->'Search and browse tool sheds'->'Galaxy main tool >> shed', it shows the first page of Valid repositories. However, clicking >> '2', '3', '4', or 'Show All' has no effect. I can only display the first >> page of repositories. >> >> However, if I search for valid tools using the menu under 'Galaxy main tool >> shed', I can get to any of the repositories listed at the Galaxy main >> toolshed. >> >> Is this a bug or a feature? >> >> David Hoover >> Helix Systems Staff >> ___ >> Please keep all replies on the list by using "reply all" >> in your mail client. To manage your subscriptions to this >> and other Galaxy lists, please use the interface at: >> >> http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] limited tool shed browse
Hi David, I cannot reproduce this behavior from my local Galaxy instance, but clicking '2', '3', '4' or 'Show All" does take a second or more to display the response. Can you provide more information about the environment you have or what you are doing to reproduce this? Thanks Greg Von Kuster On Feb 22, 2012, at 4:02 PM, David Hoover wrote: > When I click on Admin->'Search and browse tool sheds'->'Galaxy main tool > shed', it shows the first page of Valid repositories. However, clicking '2', > '3', '4', or 'Show All' has no effect. I can only display the first page of > repositories. > > However, if I search for valid tools using the menu under 'Galaxy main tool > shed', I can get to any of the repositories listed at the Galaxy main > toolshed. > > Is this a bug or a feature? > > David Hoover > Helix Systems Staff > ___ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > > http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
[galaxy-dev] limited tool shed browse
When I click on Admin->'Search and browse tool sheds'->'Galaxy main tool shed', it shows the first page of Valid repositories. However, clicking '2', '3', '4', or 'Show All' has no effect. I can only display the first page of repositories. However, if I search for valid tools using the menu under 'Galaxy main tool shed', I can get to any of the repositories listed at the Galaxy main toolshed. Is this a bug or a feature? David Hoover Helix Systems Staff ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
