Re: [galaxy-dev] version of SAM-to-BAM (CloudMap)

2014-04-04 Thread Nate Coraor
Hi Xiaofei, You should be able to install 1.1.3 by selecting revision 3 of sam_to_bam from the Preview and install page (Admin - Search and browse tool sheds - Galaxy main tool shed - sam_to_bam - Preview and install), and then clicking Install to Galaxy. [image: Inline image 1] You can tell

Re: [galaxy-dev] version of SAM-to-BAM (CloudMap)

2014-04-04 Thread Wang, Xiaofei
: Re: [galaxy-dev] version of SAM-to-BAM (CloudMap) Hi Xiaofei, You should be able to install 1.1.3 by selecting revision 3 of sam_to_bam from the Preview and install page (Admin - Search and browse tool sheds - Galaxy main tool shed - sam_to_bam - Preview and install), and then clicking

[galaxy-dev] version of SAM-to-BAM (CloudMap)

2014-04-03 Thread Wang, Xiaofei
Dear there, When I run CloudMap EMS Variant Density Mapping workflow (takes VCF of heterozygous and homozygous variants to subtract) (imported from uploaded file) on local Galaxy instance, I got this [X] , when I wanted to edit the workflow. Also, I got this The following tools are beinge