Re: [galaxy-dev] (OperationalError) no such column: history_dataset_association.extended_metadata_id

2014-04-22 Thread Dannon Baker
my mail and in your script > : should be migration_tmp instead of migrate_tmp;) > > > > Best regards, > > > > Pieter. > > > > *From:* Dannon Baker [mailto:dannon.ba...@gmail.com] > *Sent:* dinsdag 22 april 2014 14:59 > *To:* Lukasse, Pieter > *Cc:* Peter

Re: [galaxy-dev] (OperationalError) no such column: history_dataset_association.extended_metadata_id

2014-04-22 Thread Lukasse, Pieter
: Peter Cock; Galaxy Dev Subject: Re: [galaxy-dev] (OperationalError) no such column: history_dataset_association.extended_metadata_id Hey Pieter, sure. The sqlite database is in sqlite3 format, so you'll need to use 'sqlite3 database/universe.sqlite' to access it. The follow

Re: [galaxy-dev] (OperationalError) no such column: history_dataset_association.extended_metadata_id

2014-04-22 Thread Dannon Baker
> database > > > > Thanks and regards, > > > > Pieter. > > > > *From:* galaxy-dev-boun...@lists.bx.psu.edu [mailto: > galaxy-dev-boun...@lists.bx.psu.edu] *On Behalf Of *Dannon Baker > *Sent:* dinsdag 18 februari 2014 14:40 > *To:* Peter Cock > *Cc:* Galaxy Dev &

Re: [galaxy-dev] (OperationalError) no such column: history_dataset_association.extended_metadata_id

2014-04-22 Thread Lukasse, Pieter
Thanks and regards, Pieter. From: galaxy-dev-boun...@lists.bx.psu.edu [mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of Dannon Baker Sent: dinsdag 18 februari 2014 14:40 To: Peter Cock Cc: Galaxy Dev Subject: Re: [galaxy-dev] (OperationalE

Re: [galaxy-dev] (OperationalError) no such column: history_dataset_association.extended_metadata_id

2014-02-18 Thread Peter Cock
On Tue, Feb 18, 2014 at 1:40 PM, Dannon Baker wrote: > On Tue, Feb 18, 2014 at 8:30 AM, Peter Cock > wrote: >> >> This fixed the history_dataset_association.extended_metadata_id >> error - so is the most likely explanation a failed schema update? >> Might a stale migration_tmp table have been to

Re: [galaxy-dev] (OperationalError) no such column: history_dataset_association.extended_metadata_id

2014-02-18 Thread Dannon Baker
On Tue, Feb 18, 2014 at 8:30 AM, Peter Cock wrote: > This fixed the history_dataset_association.extended_metadata_id > error - so is the most likely explanation a failed schema update? > Might a stale migration_tmp table have been to blame? > Yes, I've seen this before when I've killed (or otherw