Re: [galaxy-dev] [External] Re: data from galaxy
I've already terminated the cluster, since it was for short term use. It is strange that the admins were not on the user list. Would you provide some hints for next time re-launching instance, if the same thing happens? Kathryn From: Dannon Baker [mailto:dannon.ba...@gmail.com] Sent: Sunday, March 03, 2013 6:56 PM To: Sun, Wenping [USA] Cc: Galaxy Dev Subject: Re: [External] Re: data from galaxy Can you share the cluster log with me and I'll try to figure out what's happened here? The fact that the admin users are listed indicates that you're definitely working with the same instance and a re-mounted data volume (these are parsed from universe_wsgi.ini), but I'm struggling to come up with what would yield you a working galaxy database, without the users. -Dannon On Fri, Mar 1, 2013 at 10:08 AM, Sun, Wenping [USA] sun_wenp...@bah.commailto:sun_wenp...@bah.com wrote: When galaxy instance was launched, I have two user listed as admin on cloud admin panel. However, in galaxy site, I couldn't log in with either user. When I added additional user at cloud panel to access galaxy's admin, in manage users there is no user there. Thanks for the help, Kathryn From: Dannon Baker [mailto:dannon.ba...@gmail.commailto:dannon.ba...@gmail.com] Sent: Friday, March 01, 2013 9:06 AM To: Sun, Wenping [USA] Cc: Galaxy Dev Subject: Re: [External] Re: data from galaxy I'm a little confused about the state of this instance. In the cloud admin panel, you have a user listed. And, in galaxy, you can log in as that user and act as an admin? But when you go to Manage users there are no users listed? Lastly, I've cc'd galaxy-dev here. Please do try to email the list with these questions, and not individual developers directly. -Dannon On Wed, Feb 27, 2013 at 4:38 PM, Sun, Wenping [USA] sun_wenp...@bah.commailto:sun_wenp...@bah.com wrote: Hi Dannon, I just found that the problem of user and data history from below email that happened again today. The galaxy cloud cluster was terminated 1-2 weeks ago. I have tried once 1 weeks ago to re-launch and it seemed everything was fine, both with users and data history. However, I just tried to re-launch galaxy and found that all the users not there. the admin email still on the galaxy launch page, however, on manage users from galaxy interface, there was no user there (it suppose 2 user, same as the admin I added in the first place). All the data history was not available because of that as well. I really appreciate your help on this at your early convenience!! I need to retrieve them for tomorrow morning meeting. Kathryn -Original Message- From: Dannon Baker [mailto:dannonba...@me.commailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:51 AM To: Sun, Wenping [USA] Subject: Re: [External] Re: data from galaxy Different -- the point is to create a *new* admin user since the password was lost for the other one. On Jan 21, 2013, at 9:50 AM, Sun, Wenping [USA] sun_wenp...@bah.commailto:sun_wenp...@bah.com wrote: Use different email address or the same? -Original Message- From: Dannon Baker [mailto:dannonba...@me.commailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:50 AM To: Sun, Wenping [USA] Subject: Re: [External] Re: data from galaxy Add a new user as an admin in the cloudman interface, and then register and log in as that new user. Then look at the Admin section of Galaxy and you can reset the password for your other user there. On Jan 21, 2013, at 9:47 AM, Sun, Wenping [USA] sun_wenp...@bah.commailto:sun_wenp...@bah.com wrote: No, I tried and it said not recognized. I even cannot reset the password, here is the error for reset password Mail is not configured for this Galaxy instance. Please contact an administrator. I have lot of data and don't have time to reproduce them. Please help me with this. Thanks a lot! Kathryn -Original Message- From: Dannon Baker [mailto:dannonba...@me.commailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:45 AM To: Sun, Wenping [USA] Subject: [External] Re: data from galaxy You should be able to log back in with the same username and password you used before. Is it not working? -Dannon On Jan 21, 2013, at 9:43 AM, Sun, Wenping [USA] sun_wenp...@bah.commailto:sun_wenp...@bah.com wrote: Hi Dannon, I have the whole processed data from galaxy on cloudman and they are on during the weekend. However, I found out that I was logged out this morning. My user name is still in admin. I tried to log in but I could not. This data takes time and would you please direct me how to get back to my data? Thank you in advance! Kathryn ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] [External] Re: data from galaxy
Can you share the cluster log with me and I'll try to figure out what's happened here? The fact that the admin users are listed indicates that you're definitely working with the same instance and a re-mounted data volume (these are parsed from universe_wsgi.ini), but I'm struggling to come up with what would yield you a working galaxy database, without the users. -Dannon On Fri, Mar 1, 2013 at 10:08 AM, Sun, Wenping [USA] sun_wenp...@bah.comwrote: When galaxy instance was launched, I have two user listed as admin on cloud admin panel. However, in galaxy site, I couldn’t log in with either user. When I added additional user at cloud panel to access galaxy’s admin, in “manage users” there is no user there. ** ** Thanks for the help, Kathryn ** ** *From:* Dannon Baker [mailto:dannon.ba...@gmail.com] *Sent:* Friday, March 01, 2013 9:06 AM *To:* Sun, Wenping [USA] *Cc:* Galaxy Dev *Subject:* Re: [External] Re: data from galaxy ** ** I'm a little confused about the state of this instance. In the cloud admin panel, you have a user listed. And, in galaxy, you can log in as that user and act as an admin? But when you go to Manage users there are no users listed? ** ** Lastly, I've cc'd galaxy-dev here. Please do try to email the list with these questions, and not individual developers directly. ** ** -Dannon ** ** ** ** On Wed, Feb 27, 2013 at 4:38 PM, Sun, Wenping [USA] sun_wenp...@bah.com wrote: Hi Dannon, I just found that the problem of user and data history from below email that happened again today. The galaxy cloud cluster was terminated 1-2 weeks ago. I have tried once 1 weeks ago to re-launch and it seemed everything was fine, both with users and data history. However, I just tried to re-launch galaxy and found that all the users not there. the admin email still on the galaxy launch page, however, on manage users from galaxy interface, there was no user there (it suppose 2 user, same as the admin I added in the first place). All the data history was not available because of that as well. I really appreciate your help on this at your early convenience!! I need to retrieve them for tomorrow morning meeting. Kathryn -Original Message- From: Dannon Baker [mailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:51 AM To: Sun, Wenping [USA] Subject: Re: [External] Re: data from galaxy Different -- the point is to create a *new* admin user since the password was lost for the other one. On Jan 21, 2013, at 9:50 AM, Sun, Wenping [USA] sun_wenp...@bah.com wrote: Use different email address or the same? -Original Message- From: Dannon Baker [mailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:50 AM To: Sun, Wenping [USA] Subject: Re: [External] Re: data from galaxy Add a new user as an admin in the cloudman interface, and then register and log in as that new user. Then look at the Admin section of Galaxy and you can reset the password for your other user there. On Jan 21, 2013, at 9:47 AM, Sun, Wenping [USA] sun_wenp...@bah.com wrote: No, I tried and it said not recognized. I even cannot reset the password, here is the error for reset password Mail is not configured for this Galaxy instance. Please contact an administrator. I have lot of data and don't have time to reproduce them. Please help me with this. Thanks a lot! Kathryn -Original Message- From: Dannon Baker [mailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:45 AM To: Sun, Wenping [USA] Subject: [External] Re: data from galaxy You should be able to log back in with the same username and password you used before. Is it not working? -Dannon On Jan 21, 2013, at 9:43 AM, Sun, Wenping [USA] sun_wenp...@bah.com wrote: Hi Dannon, I have the whole processed data from galaxy on cloudman and they are on during the weekend. However, I found out that I was logged out this morning. My user name is still in admin. I tried to log in but I could not. This data takes time and would you please direct me how to get back to my data? Thank you in advance! Kathryn ** ** ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] [External] Re: data from galaxy
I'm a little confused about the state of this instance. In the cloud admin panel, you have a user listed. And, in galaxy, you can log in as that user and act as an admin? But when you go to Manage users there are no users listed? Lastly, I've cc'd galaxy-dev here. Please do try to email the list with these questions, and not individual developers directly. -Dannon On Wed, Feb 27, 2013 at 4:38 PM, Sun, Wenping [USA] sun_wenp...@bah.comwrote: Hi Dannon, I just found that the problem of user and data history from below email that happened again today. The galaxy cloud cluster was terminated 1-2 weeks ago. I have tried once 1 weeks ago to re-launch and it seemed everything was fine, both with users and data history. However, I just tried to re-launch galaxy and found that all the users not there. the admin email still on the galaxy launch page, however, on manage users from galaxy interface, there was no user there (it suppose 2 user, same as the admin I added in the first place). All the data history was not available because of that as well. I really appreciate your help on this at your early convenience!! I need to retrieve them for tomorrow morning meeting. Kathryn -Original Message- From: Dannon Baker [mailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:51 AM To: Sun, Wenping [USA] Subject: Re: [External] Re: data from galaxy Different -- the point is to create a *new* admin user since the password was lost for the other one. On Jan 21, 2013, at 9:50 AM, Sun, Wenping [USA] sun_wenp...@bah.com wrote: Use different email address or the same? -Original Message- From: Dannon Baker [mailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:50 AM To: Sun, Wenping [USA] Subject: Re: [External] Re: data from galaxy Add a new user as an admin in the cloudman interface, and then register and log in as that new user. Then look at the Admin section of Galaxy and you can reset the password for your other user there. On Jan 21, 2013, at 9:47 AM, Sun, Wenping [USA] sun_wenp...@bah.com wrote: No, I tried and it said not recognized. I even cannot reset the password, here is the error for reset password Mail is not configured for this Galaxy instance. Please contact an administrator. I have lot of data and don't have time to reproduce them. Please help me with this. Thanks a lot! Kathryn -Original Message- From: Dannon Baker [mailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:45 AM To: Sun, Wenping [USA] Subject: [External] Re: data from galaxy You should be able to log back in with the same username and password you used before. Is it not working? -Dannon On Jan 21, 2013, at 9:43 AM, Sun, Wenping [USA] sun_wenp...@bah.com wrote: Hi Dannon, I have the whole processed data from galaxy on cloudman and they are on during the weekend. However, I found out that I was logged out this morning. My user name is still in admin. I tried to log in but I could not. This data takes time and would you please direct me how to get back to my data? Thank you in advance! Kathryn ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] [External] Re: data from galaxy
When galaxy instance was launched, I have two user listed as admin on cloud admin panel. However, in galaxy site, I couldn't log in with either user. When I added additional user at cloud panel to access galaxy's admin, in manage users there is no user there. Thanks for the help, Kathryn From: Dannon Baker [mailto:dannon.ba...@gmail.com] Sent: Friday, March 01, 2013 9:06 AM To: Sun, Wenping [USA] Cc: Galaxy Dev Subject: Re: [External] Re: data from galaxy I'm a little confused about the state of this instance. In the cloud admin panel, you have a user listed. And, in galaxy, you can log in as that user and act as an admin? But when you go to Manage users there are no users listed? Lastly, I've cc'd galaxy-dev here. Please do try to email the list with these questions, and not individual developers directly. -Dannon On Wed, Feb 27, 2013 at 4:38 PM, Sun, Wenping [USA] sun_wenp...@bah.commailto:sun_wenp...@bah.com wrote: Hi Dannon, I just found that the problem of user and data history from below email that happened again today. The galaxy cloud cluster was terminated 1-2 weeks ago. I have tried once 1 weeks ago to re-launch and it seemed everything was fine, both with users and data history. However, I just tried to re-launch galaxy and found that all the users not there. the admin email still on the galaxy launch page, however, on manage users from galaxy interface, there was no user there (it suppose 2 user, same as the admin I added in the first place). All the data history was not available because of that as well. I really appreciate your help on this at your early convenience!! I need to retrieve them for tomorrow morning meeting. Kathryn -Original Message- From: Dannon Baker [mailto:dannonba...@me.commailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:51 AM To: Sun, Wenping [USA] Subject: Re: [External] Re: data from galaxy Different -- the point is to create a *new* admin user since the password was lost for the other one. On Jan 21, 2013, at 9:50 AM, Sun, Wenping [USA] sun_wenp...@bah.commailto:sun_wenp...@bah.com wrote: Use different email address or the same? -Original Message- From: Dannon Baker [mailto:dannonba...@me.commailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:50 AM To: Sun, Wenping [USA] Subject: Re: [External] Re: data from galaxy Add a new user as an admin in the cloudman interface, and then register and log in as that new user. Then look at the Admin section of Galaxy and you can reset the password for your other user there. On Jan 21, 2013, at 9:47 AM, Sun, Wenping [USA] sun_wenp...@bah.commailto:sun_wenp...@bah.com wrote: No, I tried and it said not recognized. I even cannot reset the password, here is the error for reset password Mail is not configured for this Galaxy instance. Please contact an administrator. I have lot of data and don't have time to reproduce them. Please help me with this. Thanks a lot! Kathryn -Original Message- From: Dannon Baker [mailto:dannonba...@me.commailto:dannonba...@me.com] Sent: Monday, January 21, 2013 9:45 AM To: Sun, Wenping [USA] Subject: [External] Re: data from galaxy You should be able to log back in with the same username and password you used before. Is it not working? -Dannon On Jan 21, 2013, at 9:43 AM, Sun, Wenping [USA] sun_wenp...@bah.commailto:sun_wenp...@bah.com wrote: Hi Dannon, I have the whole processed data from galaxy on cloudman and they are on during the weekend. However, I found out that I was logged out this morning. My user name is still in admin. I tried to log in but I could not. This data takes time and would you please direct me how to get back to my data? Thank you in advance! Kathryn ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
