Re: [galaxy-dev] Change "Manage data Libraries"
Thank you Tyler and Carlos it's working. Siva > From: carlos.borr...@gmail.com > Date: Wed, 21 Mar 2012 16:26:48 -0400 > Subject: Re: [galaxy-dev] Change "Manage data Libraries" > To: nsi...@hotmail.com > CC: galaxy-dev@lists.bx.psu.edu > > Yes. For example setting "library_import_dir = > /GALAXY_PATH/database/files/import", you would do something like: > $ cd /GALAXY_PATH/database/files/import > $ ln -s /sequences/fasta/maize > $ ln -s /home/$USERNAME/blastdb_loc > > After this, you will have the option of selecting from "maize" or > "blastdb_loc" directories in the "Server Directory" option when > uploading a directory of files. > > Hope it helps, > Carlos > > On Wed, Mar 21, 2012 at 11:46 AM, Sivasangari NANDY > wrote: > > Hello, > > > > Do you mean a symlink ? > > > >> From: carlos.borr...@gmail.com > >> Date: Wed, 14 Mar 2012 12:57:29 -0400 > >> Subject: Re: [galaxy-dev] Change "Manage data Libraries" > >> To: nsi...@hotmail.com > >> CC: galaxy-dev@lists.bx.psu.edu > > > >> > >> On Wed, Mar 14, 2012 at 6:07 AM, Sivasangari NANDY > >> wrote: > >> > I've tried to write two times "library_import_dir" but it's not working, > >> > only the last directory is taken into account : > >> > > >> > library_import_dir = /sequences/fasta/maize/ > >> > library_import_dir = /home/***/blastdb_loc/ > >> > > >> > >> Hi Siva, > >> > >> You could have only one import directory in universe_wsgi.ini and > >> place links to other directories in the configured directory. Galaxy > >> will let you select from which directory(or link to directory) you > >> want to import files when importing. > >> > >> Hope it helps, > >> Carlos ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] Change "Manage data Libraries"
Yes. For example setting "library_import_dir = /GALAXY_PATH/database/files/import", you would do something like: $ cd /GALAXY_PATH/database/files/import $ ln -s /sequences/fasta/maize $ ln -s /home/$USERNAME/blastdb_loc After this, you will have the option of selecting from "maize" or "blastdb_loc" directories in the "Server Directory" option when uploading a directory of files. Hope it helps, Carlos On Wed, Mar 21, 2012 at 11:46 AM, Sivasangari NANDY wrote: > Hello, > > Do you mean a symlink ? > >> From: carlos.borr...@gmail.com >> Date: Wed, 14 Mar 2012 12:57:29 -0400 >> Subject: Re: [galaxy-dev] Change "Manage data Libraries" >> To: nsi...@hotmail.com >> CC: galaxy-dev@lists.bx.psu.edu > >> >> On Wed, Mar 14, 2012 at 6:07 AM, Sivasangari NANDY >> wrote: >> > I've tried to write two times "library_import_dir" but it's not working, >> > only the last directory is taken into account : >> > >> > library_import_dir = /sequences/fasta/maize/ >> > library_import_dir = /home/***/blastdb_loc/ >> > >> >> Hi Siva, >> >> You could have only one import directory in universe_wsgi.ini and >> place links to other directories in the configured directory. Galaxy >> will let you select from which directory(or link to directory) you >> want to import files when importing. >> >> Hope it helps, >> Carlos ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] Change "Manage data Libraries"
Hello, Do you mean a symlink ? > From: carlos.borr...@gmail.com > Date: Wed, 14 Mar 2012 12:57:29 -0400 > Subject: Re: [galaxy-dev] Change "Manage data Libraries" > To: nsi...@hotmail.com > CC: galaxy-dev@lists.bx.psu.edu > > On Wed, Mar 14, 2012 at 6:07 AM, Sivasangari NANDY wrote: > > I've tried to write two times "library_import_dir" but it's not working, > > only the last directory is taken into account : > > > > library_import_dir = /sequences/fasta/maize/ > > library_import_dir = /home/***/blastdb_loc/ > > > > Hi Siva, > > You could have only one import directory in universe_wsgi.ini and > place links to other directories in the configured directory. Galaxy > will let you select from which directory(or link to directory) you > want to import files when importing. > > Hope it helps, > Carlos ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] Change "Manage data Libraries"
On Wed, Mar 14, 2012 at 6:07 AM, Sivasangari NANDY wrote: > I've tried to write two times "library_import_dir" but it's not working, > only the last directory is taken into account : > > library_import_dir = /sequences/fasta/maize/ > library_import_dir = /home/***/blastdb_loc/ > Hi Siva, You could have only one import directory in universe_wsgi.ini and place links to other directories in the configured directory. Galaxy will let you select from which directory(or link to directory) you want to import files when importing. Hope it helps, Carlos ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
