Re: [galaxy-dev] Error with fastqc

2013-05-16 Thread Kathryn Sun
Dannon, Thanks and it worked! Kathryn From: Dannon Baker To: Kathryn Sun Cc: "galaxy-dev@lists.bx.psu.edu" Sent: Friday, May 10, 2013 10:07 AM Subject: Re: Error with fastqc Hi Kathryn, It looks like you haven't installed FastQC (or potentially install

Re: [galaxy-dev] Error with fastqc

2013-05-13 Thread Kathryn Sun
Dannon, Thank you very much for the help. I will install those dependancies based on the information you sent. Is there any restrictions for path/directory to be installed, for example, should those tools only be installed under ../galaxy-dist/tools? Thank you! Kathryn ___

Re: [galaxy-dev] Error with fastqc

2013-05-10 Thread Dannon Baker
Hi Kathryn, It looks like you haven't installed FastQC (or potentially installed it and just haven't made it accessible to Galaxy). You'll need to install FastQC from http://www.bioinformatics.babraham.ac.uk/projects/fastqc/ if you haven't already, and the main fastqc perl script must be executab