Re: [galaxy-dev] Fwd: Re: [galaxy-user] Linking to Compressed Data

2012-08-21 Thread Hans-Rudolf Hotz
On 08/21/2012 04:23 PM, Carlos Borroto wrote: Interesting... Hans, could you specify what tools currently available in Galaxy support gzip'd fastq files? Any in this list?: - Bowtie/Tophat - FastQC - FASTQ Groomer I can't tell you, as we don't use any of these tools in Galaxy as provided

Re: [galaxy-dev] Fwd: Re: [galaxy-user] Linking to Compressed Data

2012-08-21 Thread Peter Cock
On Tue, Aug 21, 2012 at 5:36 PM, Carlos Borroto carlos.borr...@gmail.com wrote: Not what I was hoping for. I usually link without copying into galaxy, so it won't help me. I also got excited because I thought there was the possibility of working with fastq files without having to keep