Re: [galaxy-dev] Local installation of the tool shed

2011-12-01 Thread Greg Von Kuster
Hello Louise-Amelie, On Dec 1, 2011, at 4:08 AM, Louise-Amélie Schmitt wrote: > Yes this fixes the problem, it should work fine now :) > > Thanks a lot! > > Hehe, next issues: > > 1) When I have my repo created and I click on the "Upload files to > repository", I get a Not found error in the

Re: [galaxy-dev] Local installation of the tool shed

2011-11-28 Thread Louise-Amélie Schmitt
IT WORKS!!! Thank you so much! :) Best, L-A Le 28/11/2011 16:48, Greg Von Kuster a écrit : Hello Louise-Amelie, Please try adding the following config settings to your community_wsgi.ini file, and let me know if doing so corrects the problem> = The following se

Re: [galaxy-dev] Local installation of the tool shed

2011-11-28 Thread Greg Von Kuster
Hello Louise-Amelie, Please try adding the following config settings to your community_wsgi.ini file, and let me know if doing so corrects the problem> = The following settings go somewhere outside of [app:main] # Define the proxy-prefix filter. [filter:proxy-prefix

Re: [galaxy-dev] Local installation of the tool shed

2011-11-25 Thread Greg Von Kuster
That symlink should not be necessary. Can you remove it and send me the complete paste log when you attempt to start your tool shed server? On Nov 25, 2011, at 8:23 AM, Louise-Amélie Schmitt wrote: > Hello Greg, > > This is precisely because we got the error that I added that section, like I

Re: [galaxy-dev] Local installation of the tool shed

2011-11-25 Thread Louise-Amélie Schmitt
Hello Greg, This is precisely because we got the error that I added that section, like I mentioned earlier, but it didn't change anything. I will remove it again then. Do you have any other idea that we could explore? Do you need other files? Ah, I forgot to mention that at first start, it w

Re: [galaxy-dev] Local installation of the tool shed

2011-11-25 Thread Greg Von Kuster
Hello Louise-Amelie, I believe the problem is caused by the inclusion of the following settings in your community_webapp.ini file. This sections should not be included in the tool shed config, so if you remove it things should work. Let me know if you bump into other issues. I apologize for

Re: [galaxy-dev] Local installation of the tool shed

2011-11-25 Thread Louise-Amélie Schmitt
Hello Greg Please find attached the file you asked for. Just in case, I also sent you the run_community.sh script we use to start the toolshed. Thanks a lot, Louise-Amélie Le 25/11/2011 00:36, Greg Von Kuster a écrit : Hello Louise, Can you send me your community_wsgi.ini file? I assume y

Re: [galaxy-dev] Local installation of the tool shed

2011-11-24 Thread Greg Von Kuster
Hello Louise, Can you send me your community_wsgi.ini file? I assume your copied it from community_wsgi.ini.sample, but somehow it looks like your configuration settings are attempting to start the Galaxy server instead of the tool shed server. I should be able to sort it out for you by looki

Re: [galaxy-dev] Local installation of the tool shed

2011-11-24 Thread Louise-Amélie Schmitt
Hello Greg We tried to run the toolshed like you explained (thanks a lot for the quick answer btw), it starts fine, but when we try to access it on the web, we get this error in the browser: Server Error An error occurred. See the error logs for more information. (Turn debug on to display ex

Re: [galaxy-dev] Local installation of the tool shed

2011-11-23 Thread Greg Von Kuster
Hello Nicolas, On Nov 22, 2011, at 11:04 AM, Nicolas Delhomme wrote: > Hi Greg, > > I've been scanning the mailing list, but wasn't lucky enough to find the > answer I was looking for. > > Basically, we would be interested to have our own Galaxy Tool Shed in-house, > to develop and test tools