>>>
>>> Greg Von Kuster
>>>
>>>
>>> On Mar 29, 2012, at 1:49 PM, TerAvest, Emily wrote:
>>>
>>> >
>>> > Hi Leandro,
>>> >
>>> > I am also experiencing the same problem with the latest version of
;> >
>>> > I am also experiencing the same problem with the latest version of
>>> galaxy. I just attempted to connect our sequencer for the first time
>>> yesterday. I do not have an older version of galaxy to test and compare to
>>> see if it works in earlier versions
time yesterday. I
>> > do not have an older version of galaxy to test and compare to see if it
>> > works in earlier versions. I am able to transfer data from the sequence to
>> > the import directory, however it is not moved to the data library. My
>> > data_transfer.log also has the
; > "The server could not comply with the request since it is either
>> malformed or otherwise incorrect."
>> >
>> > Does anyone have a solution for this?
>> >
>> > Thanks
>> > Emily
>> >
>> >
>> >
>> > -
Subject: Re: [galaxy-dev] Sample tracking data transfer hangs "in queue" forever
Hello Luobin,
I'm on my way to ISMB for a week, and then will be at the Galaxy Community
Conference the following week, so I won't have time to help you track this
problem down until some time in Au
t since it is either malformed
> > or otherwise incorrect."
> >
> > Does anyone have a solution for this?
> >
> > Thanks
> > Emily
> >
> >
> >
> > --
> >
> > Message: 17
> > Date: Wed, 2
mply with the request since it is either
> malformed or otherwise incorrect."
> >
> > Does anyone have a solution for this?
> >
> > Thanks
> > Emily
> >
> >
> >
> > ----------
> >
> > Message: 17
> > Date: Wed, 28 Mar 2012 13:15:47 +0200
> > From
>
> Message: 17
> Date: Wed, 28 Mar 2012 13:15:47 +0200
> From: Leandro Hermida
> To: Luobin Yang
> Cc: Galaxy Dev
> Subject: Re: [galaxy-dev] Sample tracking data transfer hangs "in
> queue" forever
> Message-ID:
>
t;
>
>
> --
>
> Message: 17
> Date: Wed, 28 Mar 2012 13:15:47 +0200
> From: Leandro Hermida
> To: Luobin Yang
> Cc: Galaxy Dev
> Subject: Re: [galaxy-dev] Sample tracking data transfer hangs "in
> queue" forever
>
anks
Emily
--
Message: 17
Date: Wed, 28 Mar 2012 13:15:47 +0200
From: Leandro Hermida
To: Luobin Yang
Cc: Galaxy Dev
Subject: Re: [galaxy-dev] Sample tracking data transfer hangs "in
queue" forever
Message-ID:
Content-Type: text/plain; charset=ISO
Dear Galaxy Dev,
The malformed library folder error on the latest galaxy-dist I am
gettting (shown below) right after data transfer I am pretty sure is a
bug and regression.
I was just able to do the exact same sample tracking setup on one of
my other Galaxy servers which is an older galaxy-dist
Dear Galaxy Dev,
Now I have another problem with the Galaxy sample tracking data
transfer. Galaxy is not able to transfer the datasets but when it
attempts to associate the datasets with the library and folder
specified in the sequencing request I get this:
2012-03-28 13:07:02,706 - datatx_18327
Dear Galaxy Dev,
Ok I have gotten further found out what was going on, in my
data_transfer.log I was getting HTTP 404 Not Authorized when the data
transfer was trying to access Galaxy API URLs
http://galaxyserver/api/... This is because we are using external user
authentication as documented in
ht
I've got the same problem and when I looked at the data_transfer.log, I saw
the following message:
2012-03-01 15:12:27,338 - datatx_13870 -
(u'9c17d84742cd2acb63d88b5bd41d968f', u'
http://xxx.xxx.xxx.xxx/api/samples/2d9035b3fc152403',
{'sample_dataset_ids': ['a799d38679e985db', '33b43b4e7093c91f']
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