Re: [galaxy-dev] Tools won't go away even after deleting it from tool_conf.xml

2012-09-06 Thread Makis Ladoukakis

Dear Hans,

Thank you for your help. Unfortunately after deleting the file and restarting 
one of them still remains. Is there anything more I could do?

Regards,
Efthymios Ladoukakis

> Date: Thu, 6 Sep 2012 14:25:11 +0200
> From: h...@fmi.ch
> To: makis4e...@hotmail.com
> CC: galaxy-u...@lists.bx.psu.edu; galaxy-...@bx.psu.edu
> Subject: Re: Tools won't go away even after deleting it from tool_conf.xml
> 
> 
> moving to galaxy-dev
> 
> 
> this is probably related to this issue:
> 
> http://dev.list.galaxyproject.org/problems-with-labels-in-the-tool-box-and-order-of-the-tools-td4655985.html
> 
> Hence, try deleting "integrated_tool_panel.xml" first before you do a 
> restart.
> 
> Regards, Hans
> 
> On 09/06/2012 01:29 PM, Makis Ladoukakis wrote:
> > Dear Galaxy users,
> >
> > Has anyone experienced this problem before? In my local instance of
> > Galaxy on a server I've deleted the path of almost all sections with
> > their corresponding tools from tool_conf.xml (wanting to leave my own
> > customized section) but after a restart and a new run of the run.sh
> > there are still two of them (SNP/WGA: Data; Filters andPhenotype
> > Association) left in the tool list with their first tool also appearing.
> > Is there a special setting for those two? Can anyone help me?
> >
> > Thank you,
> > Efthymios Ladoukakis
> >
> >
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> >
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> >
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> >
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> >
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Re: [galaxy-dev] Tools won't go away even after deleting it from tool_conf.xml

2012-09-06 Thread Hans-Rudolf Hotz


moving to galaxy-dev


this is probably related to this issue:

http://dev.list.galaxyproject.org/problems-with-labels-in-the-tool-box-and-order-of-the-tools-td4655985.html

Hence, try deleting "integrated_tool_panel.xml" first before you do a 
restart.


Regards, Hans

On 09/06/2012 01:29 PM, Makis Ladoukakis wrote:

Dear Galaxy users,

Has anyone experienced this problem before? In my local instance of
Galaxy on a server I've deleted the path of almost all sections with
their corresponding tools from tool_conf.xml (wanting to leave my own
customized section) but after a restart and a new run of the run.sh
there are still two of them (SNP/WGA: Data; Filters andPhenotype
Association) left in the tool list with their first tool also appearing.
Is there a special setting for those two? Can anyone help me?

Thank you,
Efthymios Ladoukakis


___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

   http://lists.bx.psu.edu/listinfo/galaxy-dev

To manage your subscriptions to this and other Galaxy lists,
please use the interface at:

   http://lists.bx.psu.edu/


___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
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 http://lists.bx.psu.edu/