Re: [galaxy-dev] Trackster: alignment is not showing up as 'squish'

2013-09-05 Thread Joachim Jacob | VIB |
Update: the 'dense' option does not work neither. So in summary: the 
alignment can only be viewed in 'coverage' mode.


Thanks,
Joachim

Joachim Jacob
Contact details: http://www.bits.vib.be/index.php/about/80-team


On 09/05/2013 09:52 AM, Joachim Jacob | VIB | wrote:

Hi all,


I have a problem that the mappings of an experiment suddenly don't 
show up anymore in Trackster, only when I choose 'squish' as 
visualisation format. 'Coverage' and 'dense' provide the expected 
output. So 'squish' shows nothing. But 'Pack' shows only the names, 
without the bars. Note: 'squish' and 'pack' used to work. Currently I 
am on 2013_08_12.


Other mappings (from other experiments) show up as expected. The 2 
cases side by side in this screenshot (thanks to the scratchbook 
functionality!):

https://dl.dropboxusercontent.com/u/18352887/Selection_151.png


Thanks for any help,

Joachim



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Re: [galaxy-dev] Trackster: alignment is not showing up as 'squish'

2013-09-05 Thread Jeremy Goecks
I suspect there is an issue with Trackster when changing from one mode to 
another. Can you confirm that by saving and refreshing the visualization, you 
can view the dataset in different modes?

Thanks,
J.

On Sep 5, 2013, at 4:06 AM, Joachim Jacob | VIB | wrote:

 Update: the 'dense' option does not work neither. So in summary: the 
 alignment can only be viewed in 'coverage' mode.
 
 Thanks,
 Joachim
 
 Joachim Jacob
 Contact details: http://www.bits.vib.be/index.php/about/80-team
 
 
 On 09/05/2013 09:52 AM, Joachim Jacob | VIB | wrote:
 Hi all,
 
 
 I have a problem that the mappings of an experiment suddenly don't show up 
 anymore in Trackster, only when I choose 'squish' as visualisation format. 
 'Coverage' and 'dense' provide the expected output. So 'squish' shows 
 nothing. But 'Pack' shows only the names, without the bars. Note: 'squish' 
 and 'pack' used to work. Currently I am on 2013_08_12.
 
 Other mappings (from other experiments) show up as expected. The 2 cases 
 side by side in this screenshot (thanks to the scratchbook functionality!):
 https://dl.dropboxusercontent.com/u/18352887/Selection_151.png
 
 
 Thanks for any help,
 
 Joachim
 
 
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