f this issue, could you provide
>>>the output of the following two commands?
>>>
>>>ls -lh tool_dependencies/hhsuite/
>>>ls -lh tool_dependencies/hhsuite/default/
>>>
>>> --Dave B.
>>>
>>>On Mon 02 Jun 201
ote:
>>> I tried
>>>
>>> hhsuite
>>>
>>>
>>>
>>> and that had no effect.
>>>
>>>
>>> I.
>>>
>>> --
>>>
>>> Message: 3
>>> Date: Sat, 31 May 2014
t;> I tried
>>
>> hhsuite
>>
>>
>>
>> and that had no effect.
>>
>>
>> I.
>>
>> ----------
>>
>> Message: 3
>> Date: Sat, 31 May 2014 03:51:55 +0200
>> From: Bj?rn Gr?ning
>> To: galaxy-dev@lists.bx.psu.edu
>&
and that had no effect.
I.
--
Message: 3
Date: Sat, 31 May 2014 03:51:55 +0200
From: Bj?rn Gr?ning
To: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] tool dependencies fail
Message-ID: <538935bb.7020...@gmail.com>
Content-Type: text/plain; charset=ISO-
I tried
hhsuite
and that had no effect.
I.
--
Message: 3
Date: Sat, 31 May 2014 03:51:55 +0200
From: Bj?rn Gr?ning
To: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] tool dependencies fail
Message-ID: <538935bb.7020...@gmail.com>
Content-Type
Hi Isabelle,
Not sure about specifying the absolute path for the tool dependency dir, but I
always use it. Also, my env.sh neither has a #!/bin/bash shebang line, nor
quote marks around the tool path.
If you are in the hhsuite/default/ dir and source env.sh, can you then run
hhblits yourself (a
Hi,
can you try:
hhsuite
Hope that helps, sorry for the short answer I'm too tired :)
Bjoern
Am 31.05.2014 01:53, schrieb Isabelle Phan:
Hello,
I'm following "Managed Tool Dependencies" to the letter and still can't
get Galaxy to find the executable. Is this page
https://wi
