Sure, if you are fast we can include this in the galaxy-stable:16.01
release which will be release very soon.
You can also create a PR against the 16.01 branch on:
https://github.com/bgruening/docker-galaxy-stable/tree/16.01
Ciao,
Bjoern
Am 27.01.2016 um 09:22 schrieb Cameron Jack:
> Thanks for
Thanks for the quick response Marius and Bjoern, really appreciate the
help!
Since I need to make this work in the next day or so, would you be
interested in seeing what my script looks like Bjoern? I imagine it¹ll
only be a couple of lines though to do this.
Thanks again,
Cam
On 27/01/2016 7:17
Hi Cam,
as Marius already pointed out this is easily possible with bioblend.
I would create a small script that takes the path to the GA file as
input, preferably also a URL, and populates this in Galaxy.
I would be interested to include such a script in the Main Docker
container, so everyone can
Hi Cam,
this would be possible using bioblend (
https://bioblend.readthedocs.org/en/latest/api_docs/galaxy/all.html?highlight=workflow#module-bioblend.galaxy.workflows).
Take a look at the `import_workflow_from_local_path` function.
You'll need to have galaxy running for this (same as for installi
Hi all,
I've been developing a Dockerfile and repositories to enable users to set up an
NGS forensics pipeline. So far so good, I can build the image (based on Bjoern
Gruening's excellent galaxy-stable Docker image) and incorporate all the
various tools I need, including custom ones with custo
