Re: [galaxy-dev] Manage jobs interface error
Hi Dannon, A 'hg pull -u' brought me up to changeset 14925:2db0fb9594d6 so I'll try later this week.I will tell you if everything went well. Thanks,Cristian Date: Tue, 9 Dec 2014 16:30:10 -0500 Subject: Re: [galaxy-dev] Manage jobs interface error From: dannon.ba...@gmail.com To: tuto...@hotmail.com CC: galaxy-dev@lists.galaxyproject.org Ok, found it. This was fixed in revision 14955:5454f62f54df and applied to the stable branch in 14968:cb0c2ea402e4, and an update should fix your problem. -Dannon On Tue, Dec 9, 2014 at 3:32 PM, C. Ch. wrote: Hi Dannon, Sorry, forgot to add that info. The changeset is 14866:295fd99b1d57 CristianDate: Tue, 9 Dec 2014 15:30:23 -0500 Subject: Re: [galaxy-dev] Manage jobs interface error From: dannon.ba...@gmail.com To: tuto...@hotmail.com CC: galaxy-dev@lists.galaxyproject.org Hey Cristian, What revision are you running? -Dannon On Tue, Dec 9, 2014 at 3:29 PM, C. Ch. wrote: Hi all, I have had the following problem while trying to access the "manage jobs" page. File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/middleware/error.py', line 149 in __call__ app_iter = self.application(environ, sr_checker)File '/home/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py', line 84 in __call__ return self.application(environ, start_response)File '/home/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py', line 633 in __call__ return self.application(environ, start_response)File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 132 in __call__ return self.handle_request( environ, start_response )File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 190 in handle_request body = method( trans, **kwargs )File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/decorators.py', line 87 in decorator return func( self, trans, *args, **kwargs )File '/home/galaxy/galaxy-dist/lib/galaxy/web/base/controllers/admin.py', line 1110 in jobs job_lock = trans.app.job_manager.job_handler.job_queue.job_lockAttributeError: 'NoopQueue' object has no attribute 'job_lock' It persists through galaxy restarts (I'm installing a production server so restarts happen several times a day). At some point I could access the interface but now I can not. I think I could access the interface when I had the [server:main] still in the galaxy.ini. I have two web servers (web0 and web1) and two handlers (handler0 and handler1) in galaxy.ini, as shown in the wiki documentation. I also have the job_conf.xml defining a local plugin with the two handlers and the local destination. How can I get the job manager interface back? Thanks!Cristian ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Re: [galaxy-dev] Manage jobs interface error
Ok, found it. This was fixed in revision 14955:5454f62f54df and applied to the stable branch in 14968:cb0c2ea402e4, and an update should fix your problem. -Dannon On Tue, Dec 9, 2014 at 3:32 PM, C. Ch. wrote: > Hi Dannon, > > Sorry, forgot to add that info. > > The changeset is 14866:295fd99b1d57 > > Cristian > -- > Date: Tue, 9 Dec 2014 15:30:23 -0500 > Subject: Re: [galaxy-dev] Manage jobs interface error > From: dannon.ba...@gmail.com > To: tuto...@hotmail.com > CC: galaxy-dev@lists.galaxyproject.org > > > Hey Cristian, > > What revision are you running? > > -Dannon > > On Tue, Dec 9, 2014 at 3:29 PM, C. Ch. wrote: > > Hi all, > > I have had the following problem while trying to access the "manage jobs" > page. > > File > '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/middleware/error.py', > line 149 in __call__ > app_iter = self.application(environ, sr_checker) > File > '/home/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py', > line 84 in __call__ > return self.application(environ, start_response) > File > '/home/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py', > line 633 in __call__ > return self.application(environ, start_response) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 132 > in __call__ > return self.handle_request( environ, start_response ) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 190 > in handle_request > body = method( trans, **kwargs ) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/decorators.py', > line 87 in decorator > return func( self, trans, *args, **kwargs ) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/base/controllers/admin.py', > line 1110 in jobs > job_lock = trans.app.job_manager.job_handler.job_queue.job_lock > AttributeError: 'NoopQueue' object has no attribute 'job_lock' > > It persists through galaxy restarts (I'm installing a production server so > restarts happen several times a day). At some point I could access the > interface but now I can not. I think I could access the interface when I > had the [server:main] still in the galaxy.ini. > I have two web servers (web0 and web1) and two handlers (handler0 and > handler1) in galaxy.ini, as shown in the wiki documentation. I also have > the job_conf.xml defining a local plugin with the two handlers and the > local destination. > > How can I get the job manager interface back? > > Thanks! > Cristian > > ___ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > https://lists.galaxyproject.org/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ > > > ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Re: [galaxy-dev] Manage jobs interface error
Hi Dannon, Sorry, forgot to add that info. The changeset is 14866:295fd99b1d57 CristianDate: Tue, 9 Dec 2014 15:30:23 -0500 Subject: Re: [galaxy-dev] Manage jobs interface error From: dannon.ba...@gmail.com To: tuto...@hotmail.com CC: galaxy-dev@lists.galaxyproject.org Hey Cristian, What revision are you running? -Dannon On Tue, Dec 9, 2014 at 3:29 PM, C. Ch. wrote: Hi all, I have had the following problem while trying to access the "manage jobs" page. File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/middleware/error.py', line 149 in __call__ app_iter = self.application(environ, sr_checker)File '/home/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py', line 84 in __call__ return self.application(environ, start_response)File '/home/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py', line 633 in __call__ return self.application(environ, start_response)File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 132 in __call__ return self.handle_request( environ, start_response )File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 190 in handle_request body = method( trans, **kwargs )File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/decorators.py', line 87 in decorator return func( self, trans, *args, **kwargs )File '/home/galaxy/galaxy-dist/lib/galaxy/web/base/controllers/admin.py', line 1110 in jobs job_lock = trans.app.job_manager.job_handler.job_queue.job_lockAttributeError: 'NoopQueue' object has no attribute 'job_lock' It persists through galaxy restarts (I'm installing a production server so restarts happen several times a day). At some point I could access the interface but now I can not. I think I could access the interface when I had the [server:main] still in the galaxy.ini. I have two web servers (web0 and web1) and two handlers (handler0 and handler1) in galaxy.ini, as shown in the wiki documentation. I also have the job_conf.xml defining a local plugin with the two handlers and the local destination. How can I get the job manager interface back? Thanks!Cristian ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Re: [galaxy-dev] Manage jobs interface error
Hey Cristian, What revision are you running? -Dannon On Tue, Dec 9, 2014 at 3:29 PM, C. Ch. wrote: > Hi all, > > I have had the following problem while trying to access the "manage jobs" > page. > > File > '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/middleware/error.py', > line 149 in __call__ > app_iter = self.application(environ, sr_checker) > File > '/home/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py', > line 84 in __call__ > return self.application(environ, start_response) > File > '/home/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py', > line 633 in __call__ > return self.application(environ, start_response) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 132 > in __call__ > return self.handle_request( environ, start_response ) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 190 > in handle_request > body = method( trans, **kwargs ) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/decorators.py', > line 87 in decorator > return func( self, trans, *args, **kwargs ) > File '/home/galaxy/galaxy-dist/lib/galaxy/web/base/controllers/admin.py', > line 1110 in jobs > job_lock = trans.app.job_manager.job_handler.job_queue.job_lock > AttributeError: 'NoopQueue' object has no attribute 'job_lock' > > It persists through galaxy restarts (I'm installing a production server so > restarts happen several times a day). At some point I could access the > interface but now I can not. I think I could access the interface when I > had the [server:main] still in the galaxy.ini. > I have two web servers (web0 and web1) and two handlers (handler0 and > handler1) in galaxy.ini, as shown in the wiki documentation. I also have > the job_conf.xml defining a local plugin with the two handlers and the > local destination. > > How can I get the job manager interface back? > > Thanks! > Cristian > > ___ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > https://lists.galaxyproject.org/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ > ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
[galaxy-dev] Manage jobs interface error
Hi all, I have had the following problem while trying to access the "manage jobs" page. File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/middleware/error.py', line 149 in __call__ app_iter = self.application(environ, sr_checker)File '/home/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py', line 84 in __call__ return self.application(environ, start_response)File '/home/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py', line 633 in __call__ return self.application(environ, start_response)File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 132 in __call__ return self.handle_request( environ, start_response )File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 190 in handle_request body = method( trans, **kwargs )File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/decorators.py', line 87 in decorator return func( self, trans, *args, **kwargs )File '/home/galaxy/galaxy-dist/lib/galaxy/web/base/controllers/admin.py', line 1110 in jobs job_lock = trans.app.job_manager.job_handler.job_queue.job_lockAttributeError: 'NoopQueue' object has no attribute 'job_lock' It persists through galaxy restarts (I'm installing a production server so restarts happen several times a day). At some point I could access the interface but now I can not. I think I could access the interface when I had the [server:main] still in the galaxy.ini. I have two web servers (web0 and web1) and two handlers (handler0 and handler1) in galaxy.ini, as shown in the wiki documentation. I also have the job_conf.xml defining a local plugin with the two handlers and the local destination. How can I get the job manager interface back? Thanks!Cristian ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
