Hi Evan,
Am 19.01.2015 um 17:43 schrieb Evan Bollig PhD:
Hey Bjoern,
I'm playing with your docker recipes
(https://github.com/bgruening/docker-recipes) today and I've been
waiting for the galaxyp image build to complete for about 3 hours. For
the majority of that time it has been stuck on
RUN install-repository --url http://testtoolshed.g2.bx.psu.edu/ -o
bgruening --name package_openms_latest
The Tool Shed was down today, maybe this was a reason?
What is the typical build time you experience? Any thoughts on how
this could have gone wrong?
This is a good question. OpenMS is a beast. It can take several hours.
On one of my computers I needed to add:
threadpool_kill_thread_limit = 31600
threadpool_hung_thread_limit = 2
to the galaxy.ini to not get a timeout during installations. Maybe you
can add this as well?
Cheers,
Bjoern
Cheers,
-Evan Bollig
Research Associate | Application Developer | User Support Consultant
Minnesota Supercomputing Institute
599 Walter Library
612 624 1447
e...@msi.umn.edu
boll0...@umn.edu
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