Hi Jorrit,
Would you like to share the workflow names? Maybe before and after for the
three? I could test in a default local to see if reproducible.
Your question was from a few weeks ago and I am not sure if you are using
the master branch of 15_10 or something earlier or the dev branch, so
sharing a bit about your setup would probably help (including if this is
even still a problem).
Thanks!
Jen
--
Jennifer Hillman-Jackson
Galaxy Application Support
http://usegalaxy.org
http://galaxyproject.org
http://biostar.usegalaxy.org
On Sun, Nov 22, 2015 at 12:48 PM, Jorrit Boekel wrote:
> Hi all,
>
> I noticed something strange in my (latest) galaxy-dist. I have around
> 10-20 workflows, which are in certain cases very similar for e.g. slightly
> different experimental setups with the same output. I then usually copy the
> first wf and adapt a few steps to fit the second one. Anyway, they are on a
> testserver and I export them to import in my production instance. There I
> noticed that sometimes in (always the same 3) workflows, the export to json
> changes the ‘name’ attribute of the workflow. So when importing them in
> production, the wf has a different name.
>
> I haven’t been able to pinpoint where the problem lies, but the new name
> is very similar to the old one. I therefore believe that it may be that I
> have copied the workflow and the name of the source-wf is hanging around in
> some db table somewhere. Unlikely as it sounds. To be more specific it
> doesn’t show up when I do bioblend: workflows.show_workflow(id=x), but only
> when export_workflow_json(). It only happens in 3 of my workflows and I
> have surely copied more of them.
>
> Easy enough to workaround though, and kind of hoping this is a glitch in
> my setup only but wanted to let you know.
>
> cheers,
> —
> Jorrit Boekel
> Proteomics systems developer
> BILS / Lehtiö lab
> Scilifelab Stockholm, Sweden
>
>
>
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