Hi Nicola,
thanks. That worked.
Matthias
On 25.04.2018 12:07, Nicola Soranzo wrote:
Hi Matthias,
if you add
'openjdk >8.0.121'
to your conda command below, you should get openjdk from conda-forge.
For an explanation, see:
https://github.com/bioconda/bioconda-recipes/pull/8588
https://gi
Hi Matthias,
if you add
'openjdk >8.0.121'
to your conda command below, you should get openjdk from conda-forge.
For an explanation, see:
https://github.com/bioconda/bioconda-recipes/pull/8588
https://github.com/conda/conda/issues/6948#issuecomment-369360906
Cheers,
Nicola
On 25/04/18 10:4
Hi Bjoern,
still struggling with your suggestion:
> can you make sure FASTQC gets the openjdk version from conda-forge and
> not from defaults? This will fix our one problem.
conda create -y --override-channels --channel iuc --channel bio
conda --channel conda-forge --channel defaults --name __
Hi Matthias,
can you make sure FASTQC gets the openjdk version from conda-forge and
not from defaults? This will fix our one problem.
MetaProSIP should add additional dependencies to the conda package.
Ideally no requirements are needed on the system level. This is not
always possible, for e
