Hi,
Our local instance runs on CentOS 5 and is happy with it :)
We didn't have the choice though.
Regards
L-A
Le 07/06/2011 14:00, Matloob Khushi a écrit :
Hello Galaxy Users
We are anticipating setting up a local instance of Galaxy and
wondering what is the most popular (or best) flavour
From: Tilahun Abebe tilahun.ab...@uni.edu
We are trying to load Illumina data to our local Galaxy instance. The
files are between 700 MB and 2.2 GB. Files below 2 GB load in less
than
5 minutes. Files larger than 2 GB don't upload at all. We installed
Galaxy locally because we thought
Matloob Khushi wrote:
Hello Galaxy Users
We are anticipating setting up a local instance of Galaxy and wondering what
is the most popular (or best) flavour of Linux people out there using.
I wonder which OS on UseGalaxy.org has been used. Thanks for your help.
Hi Matloob,
The public
Paul-Michael Agapow wrote:
From: Tilahun Abebe tilahun.ab...@uni.edu
We are trying to load Illumina data to our local Galaxy instance. The
files are between 700 MB and 2.2 GB. Files below 2 GB load in less
than
5 minutes. Files larger than 2 GB don't upload at all. We installed
Thank you Paul and Nate. We will try the options you suggested.
One thing we found to work much faster (less than 5 minutes for most
files) is to upload zipped data. Galaxy could upload and unzip the files
without any problem. It doesn't seem any sequence data is lost. Has
anyone tried this
Tilahun Abebe wrote:
Thank you Paul and Nate. We will try the options you suggested.
One thing we found to work much faster (less than 5 minutes for most
files) is to upload zipped data. Galaxy could upload and unzip the
files without any problem. It doesn't seem any sequence data is
lost.
Jen,
Thanks for all your help.
Here's the final Galaxy workflow for doing FUZZNUC on a BED file from UCSC
Table Browser, then producing BED file that you can view in UCSC.
http://main.g2.bx.psu.edu/u/curtish-uab/w/fuzznucucscbed
I do not include the Get Flank operation in this base
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