subject:"\[galaxy\-user\] database on the cloud"

Re: [galaxy-user] database on the cloud

2011-04-18 Thread Enis Afgan

Hi Thomas, It turns out you discovered a bug in the cloud setup. We're missing a 2bit file and a respective reference to the file for the extract genomic DNA tool. We'll update the deployment but in the mean time you can configure the instance yourself with just a few commands: # connect to the

Re: [galaxy-user] database on the cloud

2011-04-18 Thread Blake L. Dixon

Take me off this list, please. - Original Message - From: Enis Afgan afg...@gmail.com Date: Monday, April 18, 2011 1:41 pm Subject: Re: [galaxy-user] database on the cloud To: Randall, Thomas (NIH/NIEHS) [C] thomas.rand...@nih.gov Cc: galaxy-user@lists.bx.psu.edu galaxy-user

[galaxy-user] database on the cloud

2011-04-15 Thread Randall, Thomas (NIH/NIEHS) [C]

I set up a galaxy instance on the cloud, but got the following error when trying to convert a bed file of hg18 coordinates to fasta sequence with the Extract Genomic DNA tool as a test of the functionality of this instance: No sequences are available for 'hg18', request them by reporting this