Re: [galaxy-user] The size of the history

Jiwen, After purging datasets, the history size update has a bit of a delay. Let us know if you find that after a while it hasn't recalculated to what you expect the value to be. -Dannon On Feb 1, 2012, at 4:21 PM, 杨继文 wrote: > Hi all, > First I would like to thank you for your fast replies

[galaxy-user] The size of the history

Hi all, First I would like to thank you for your fast replies to my questions. As you know, at top right corner of Galaxy window, there are records of the history size and how many percentage of memory space has been used. I found that the number in the records only increases, but doesn't decreas

Re: [galaxy-user] FTP and Biomart

Hello Jiwen, For the FTP operation, please see the instructions in this wiki and screencast. There are no known issues, so double checking the steps is a good place to start with troubleshooting the process: http://wiki.g2.bx.psu.edu/Learn/Upload%20via%20FTP For Biomart, certain fields have H

Re: [galaxy-user] A simple operation didn't work out

Hi Jiwen, The way the filter expression evaluates, you need to specify that you're matching on the string '19', and not the numerical value 19. Everything should work if you rerun with the filter condition: c1=='19' Thanks! Dannon On Feb 1, 2012, at 9:56 AM, 杨继文 wrote: > Hi All, > I got

Re: [galaxy-user] clustering algorithm in Galaxy

Hello Daniel, I see the mailing list question you are referring to. I am fairly certain that the user developed their own wrapper. I checked in the Tool Shed and didn't find a DNA Clust wrapper added. You could consider posting to galaxy-...@bx.psu.edu to see if anyone or if that specific use

[galaxy-user] A simple operation didn't work out

Hi All, I got a bit disappointed when I failed in the following operation which seems to be simple. I uploaded mouse annotation/reference gene sets (GTF format) to Galaxy. The file is located at ftp://ftp.ensembl.org/pub/release-65/gtf/mus_musculus/. As far as I know, GTF file is t

[galaxy-user] FTP and Biomart

Hi All, Today I have problem to use FTP to upload data to Galaxy. I used Filezilla software and the server name "main.g2.bx.psu.edu", but I can not connect to the server. Something wrong with my operation? Also, when I tried to get data from Biomart to Galaxy, I got the error warning "the up