Re: [galaxy-user] Export to file

2012-10-22 Thread Dave Corney
Hi Jeremy, That's really wonderful - thanks so much for taking the time and effort to do this! When you say large history, is there a size limit that I should be aware of, or will it handle anything that my quota can accept? Thanks, Dave On Sat, Oct 20, 2012 at 2:44 PM, Jeremy Goecks

Re: [galaxy-user] Export to file

2012-10-22 Thread Jeremy Goecks
When you say large history, is there a size limit that I should be aware of, or will it handle anything that my quota can accept? It will handle anything your quota can accept. Best, J. ___ The Galaxy User list should be used for the

Re: [galaxy-user] Export to file

2012-10-20 Thread Jeremy Goecks
I've reworked the code to handle large history export files in -central changeset afc8e9345268., and this should solve your issue. This change should make it out to our public server this coming week. Best, J. On Oct 18, 2012, at 12:36 PM, Dave Corney wrote: Hi Jeremy, Thanks for your

Re: [galaxy-user] Export to file

2012-10-18 Thread Dave Corney
Hi Jeremy, Thanks for your offer of help. By the time I got your email I had already added many new jobs to the history that are either running now or waiting to run. Since I read somewhere that if the history is running then there are problems exporting I shared a clone of the history with you.

[galaxy-user] Export to file

2012-10-17 Thread Dave Corney
Hi list, Is there a currently a known problem with the export to file function? I'm trying to migrate some data from the public galaxy to a private one; the export function worked well with a small (~100mb) dataset, but it has not been working with larger datasets (2GB) and I get the error:

Re: [galaxy-user] Export to file

2012-10-17 Thread Jennifer Jackson
Hi Dave, Yes, if your Galaxy instance is on the internet, for entire history transfer, you can skip the curl download and just enter the URL from the public Main Galaxy server into your Galaxy directly. To load large data over 2G that is local (datasets, not history archives), you can use

Re: [galaxy-user] Export to file

2012-10-17 Thread Jeremy Goecks
Dave, There's likely something problematic about your history that causing problems. Can you share with me the history that's generating the error? To do so, from the history options menu -- Share/Publish -- Share with a User -- my email address Thanks, J. On Oct 17, 2012, at 6:58 PM,