[galaxy-user] Galaxy Question

2012-12-17 Thread D. A. Cowart
Hello, I would like to use Galaxy to divide a very large Ilumnia fasta file (~3GB) into separate fasta files. Is this possible on Galaxy? Here is an example of the reads: HWI-ST156:535:C10GLACXX:8:1101:1195:1080 1:N:0:CGGTTGT

Re: [galaxy-user] Galaxy Question

2012-12-17 Thread Jennifer Jackson
Hello Dominique, Would the tool 'NGS: QC and manipulation - Barcode Splitter' meet your needs? Please see the tool's help for usage. Another option is to first covert the file to tabular with 'FASTA manipulation -FASTA-to-Tabular', then use the 'Filter and Sort - Filter' tool. The match

Re: [galaxy-user] Galaxy Question

2012-12-17 Thread Jennifer Jackson
Hi Dominique, This means that there were no results. My fault - the Filter tool is the wrong choice. The Select tool, as you were starting with, is better for this case. The issues you had originally were most likely with format or the regular expression. So, be sure to do the following this