Hi,
When using the gene BED to codon BED tool, I noticed that it is not
accurately reporting the codons that make up a gene. For example, some of
the codon are missing (particularly ones that span exon-exon junctions.
Also, when changing reading frame from one exon to the next, the codons are
not
Hi Anthony,
There are no known problems with the gene/codon BED tool, but if you
have an example of a problem, I will take a look.
Some items to double check first:
1 - Input is a BED 12 file
2 - Keep in mind that coordinates are 0-based, half-open start, fully
closed end and always
2 matches
Mail list logo
