Re: [galaxy-user] How to do an GO enrichment analysis in Galaxy?

2012-10-08 Thread Björn Grüning
Hi Yan,

have a look at the blast2GO wrapper in the toolshed. If you already have
gene-ids you can download the GO in an appropriate format and intersect
with your ids.

Hope that works,
Bjoern

 Hi everyone,
 
  
 
 I got a list of differentially expressed genes from my RNA-seq data.
 Is there a tool on Galaxy that I can do the GO enrichment analysis for
 the differentially expressed genes? Any help or suggestion is highly
 appreciated!
 
  
 
 Best regards,
 
 Yan
 
 
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[galaxy-user] How to do an GO enrichment analysis in Galaxy?

2012-10-07 Thread Yan He
Hi everyone,

 

I got a list of differentially expressed genes from my RNA-seq data. Is
there a tool on Galaxy that I can do the GO enrichment analysis for the
differentially expressed genes? Any help or suggestion is highly
appreciated!

 

Best regards,

Yan

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The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
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