Re: [galaxy-user] Importing GTF into Galaxy

2011-02-23 Thread Jennifer Jackson
Hello Martin, A few other users had problems with this particular datasets last week when importing from UCSC. It was likely a transient problem, as "Get Data -> UCSC main" imports are working OK now from our test cases. Please try again and see if you can get the entire genome. Remember tha

[galaxy-user] Importing GTF into Galaxy

2011-02-17 Thread Martin, David A.
Hi, I have been trying to get reference data from the ucsc browser into Galaxy, but when I try to get the rat genome in gtf format, I only get files halfway through chomosome 10. This happens with both of the available builds for the rat. I am guessing this is a problem with the UCSC files a