Hi PT,
What exactly do you mean by "Galaxy on the Cloud appears to expect that the
imported and converted fastq files are in the same S3 bucket where the
fastq.gz files were"? Once imported from S3, you're correct in that
everything will be on the local EBS volume.
-Dannon
On Sun, Oct 6, 2013
Hi,
I had fastq.gz files in an Amazon S3 bucket. I created a Galaxy on the Cloud
instance using CloudMan. I used GetData and pasted in the url's of the
fastq.gz files into Galaxy on the Cloud. They were successfully imported
into the session and converted to fastq's, it seems. However, at the n
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