[galaxy-user] Mapping Illumina reads using LASTZ

Hello, I am trying to map metagenomic Illumina reads to the reference genomes. I used Galaxy LASTZ tool to align Illumina reads to bacteriophage B3, that genomic sequence I downloaded from NCBI website. LASTZ produced an output file in SAM format, the file size is 1.8 MB and contain 16,000 lines.

Re: [galaxy-user] Mapping Illumina reads using LASTZ

Hi, If you download the BAM file and it's index ("BAI") file onto your desktop, you should be able to open it directly in Integrated Genome Browser. Just be sure to put the BAM and its BAI file in the same folder. If you run into any problems, please let us know. You can post a message on the IGB

Re: [galaxy-user] 2011 Galaxy Community Conference, May 25-26, Lunteren, The Netherlands

Hello all, This is a reminder that early registration for the 2011 Galaxy Community Conference closes in less than two weeks. You can save 20% on registration if you register on or before 24 April. http://galaxy.psu.edu/gcc2011/Register.html We've also added a partial list of confirmed speaker