Hello Jo,
This is a great tutorial to get started:
http://main.g2.bx.psu.edu/galaxy101
The tutorial uses data from UCSC. To load your own data, go to Get Data
- Upload File from your computer in the left pane, very top. Options
are for direct upload (if file is very small, under 2MB) or FTP.
Hi,
I was wondering if there was a way to easily use (or move) data between
different histories. I have a large fasta file that I'd like to use in a
work flow, but this fasta file only shows up when I have the original
history open. Is there a way to select data files that exist in different
Yes, you can copy datasets to other histories, no need to re-upload. To do
this, click on Options in the history panel, and then Copy Datasets. From
here, you can pick a source history (defaulted to the current active history),
select the datasets to be copied, and then choose a destination
I am new to Galaxy and I am not sure whether these topics were discussed
earlier. I followed the steps up to cufflinks and I did not have any
problems. Thanks for the RNA seq tutorial. My questions are
1. How do I know the number of reads mapped against the reference genome
used after Top Hat
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