[galaxy-user] blastn Q.

2011-07-26 Thread Todd Yilk
Hello all, I'm using the blastn tool and Galaxy is generating this command (pasting from the log file): command is: perl /opt/galaxy/dev/galaxy_dist_dev_umma/tools/blast/psub -l galaxy_normal.c --fasta /opt/galaxy/dev/galaxy_dist_dev_umma/database/files/001/dataset_1377.dat --cat

Re: [galaxy-user] BAM files loading and mandatory grooming

2011-07-26 Thread Jennifer Jackson
Hello L-A, The load is necessary to create/link the index .bam index. No work-around is available, however if you develop one, we would be glad to consider it as an addition. If there are any updates on our side, we will send more information. Thanks! Jen Galaxy team On 7/18/11 2:05 AM,

Re: [galaxy-user] BAM files loading and mandatory grooming

2011-07-26 Thread Mai Huynh
Hello, Please sign me off the Galaxy email list. I keep getting galaxy emails that I don't know of. I was in Genomic class and had taken galaxy project. Now, that I'm done. Please again sign me off. Thank you so much for your time. Best regards, Mai H. P.S. my email is mhu...@uark.edu

Re: [galaxy-user] BAM files loading and mandatory grooming

2011-07-26 Thread Jennifer Jackson
Hello Mai, I removed you from the galaxy-user list (you were not subscribed to galaxy-dev). For others who may be following, subscriptions can be managed here: http://lists.bx.psu.edu/listinfo/galaxy-user http://lists.bx.psu.edu/listinfo/galaxy-dev Take care, Jen Galaxy team On 7/26/11