[galaxy-user] bowtie and bwa queue'd up for hours

Does anyone know why these mapping programs are taking so long to start running? Is there a problem with the servers? -- Keith E Giles, PhD Assistant Professor Biochemistry & Molecular Genetics University of Alabama at Birmingham ___ The Ga

[galaxy-user] Galaxy-Announce: A new, moderated, low-volume Galaxy Mailing List

Hello all, There is a new mailing list in the Galaxy: Galaxy-Announce. Galaxy-Announce is a *moderated, low-volume *mailing list. Galaxy-Announce complements the existing Galaxy-User (about the public server at UseGalaxy.org) and Galaxy-Dev (deployment and development) mailing lists. However, un

[galaxy-user] Define a path for the command files

Hi everybody, I am integrating a new tool which depends on several other libraries (part of the tool). when galaxy run my tool, it can find main command but not the deepest. where should I define the path of the libraries and command folders I need. by teh way, all these commands and librarie

[galaxy-user] Define a path for the command files

I qouted this error message from galaxy, part of it: Could not find the main class: ConvertSegemehlIraExtended_awk. Program will exit. Unable to access jarfile vispaAssemb.jar Unable to access jarfile vispaEM.jar From: galaxy-dev-boun...@lists.bx.psu.edu [galaxy