[galaxy-user] chimeric reads detection

hello, I am a beginner Galaxy user and I need to perform chimeric sequences detection on single end reads (from metatranscriptomic samples). Do someone know a tool for that? thanks hadrien ___ The Galaxy User list should be used for the di

[galaxy-user] BWA failing to index?

I just installed a new instance of Galaxy and bwa_wrappers from the main toolshed. I then uploaded a reference genome along with two FASTQ files in order to run "Map with BWA for Illumina". When I run it, I get this error: The alignment failed. Error aligning sequence. [bwa_aln] 17bp reads: max_

[galaxy-user] genomic coordinates to Enterz gene ids

I have a list of around 3000 genomic coordinates of mouse genome and I would iike to extract gene name Enetrz gene ids Is it possible to extract this information in galaxy. Thanks Kanwar ___ The Galaxy User list should be used for the discus