[galaxy-user] Help: Mapping with Bowtie does not start

2014-03-07 Thread meike.l...@mdc-berlin.de
Hello, I am trying to map sequences with Bowtie for Illumina. I have been waiting for a whole day now but it still says Job is waiting to run. Are the jobs stuck in a queue or is there any other problem? Thanks a lot in advance! Meike

[galaxy-user] Galaxy - error

2014-03-07 Thread Flávia Aburjaile
Dear Malito, I am PhD student and I am working with a bacterial transcriptome. A few days ago, i have a problem to obtain data in DESeq and Edge-r on the plataform galaxy. I get the message no peek at the end of the process, even with the task g reen. Have you had this problem? I would like to

Re: [galaxy-user] Compute an expression

2014-03-07 Thread Jennifer Jackson
Hello Hamid, Try using the Filter and Sort - Filter tool instead and see if that produces the output you expect. This same query syntax should be fine (no quotes). Best, Jen Galaxy team On 2/27/14 2:14 AM, Hamid Qaedi wrote: Dear All I have a tabular file and using compute (version 1.1.0)