Hi Jen,As the title, I have a [fasta] file that obtained from a [gtf] file,
cuff102.1atcgtaaagggcgatcuff103.1gtcgttgactgtc
and I want to get the output like this to filter the sequences that contain any
not[ATCG] character?
cuff102.1atcgtaaagggcgat
I have a large of sequences to filter. I
tool and Matching:
^..*\t[ATCGatcg]+$
(Only one dot is really required, this is just how I always do it.
Adds a bit of a format sanity check into the filter).
Hope this helps!
Jen
Galaxy team
On 12/8/13 6:21 PM, 朱师云 wrote
it that way. There are usually a few ways to
do the same thing when using a regex.
But, I am glad that this helped a bit and good luck with the query,
Jen
Galaxy team
On 12/9/13 7:06 AM, 朱师云 wrote:
Hi
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