[galaxy-user] Indel analysis

2011-09-28 Thread Golbus, Jessica
Hi- I am using Galaxy for Indel analysis. Does the Indels from Sam analysis use Dindel to pull variation? Thanks! ** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues __

[galaxy-user] SamTools processing issue

2011-10-03 Thread Golbus, Jessica
Hi- I am currently working with one of Illumina's older Bam files and trying to run SamTools Pileup. Unfortunately, the server has repeatedly timed out on me and I am unable to run the program on my file. I was wondering if other people are having trouble running Samtools on human genome .bam