[galaxy-user] filtering fastq file according to qual score

2011-07-30 Thread Haluk Dogan
Hi, I am trying to filter my fastq file with the condition of if quality score of reads is less then min score. So far, I have tried both *fastq_quality_filter* and *Filter FASTQ under NGS: QC and manipulation** *but I was not be able to do it. In the following you can see my fastq file. @F4HZV

Re: [galaxy-user] filtering fastq file according to qual score

2011-07-31 Thread Haluk Dogan
nipulation" that may help you: > Filter FASTQ reads by quality score and length > FASTQ Quality Trimmer by sliding window > FASTQ Masker by quality score > Regards, > Florent > > > On 31/07/11 05:58, Haluk Dogan wrote: > > Hi, > > I am trying t