Re: [galaxy-user] combine data

2011-11-18 Thread Kevin L
Text Manipulation -> Concatenate datasets tail-to-head is the equivalent of cat :) btw galaxy also accepts gzipped files so you can upload it faster that way Cheers Kevin On 18 November 2011 16:40,

Re: [galaxy-user] Looking for an easy "load test" for Galaxy Cloudman

2012-01-22 Thread Kevin L
There's public avail whole genome data avail at bionimbus that u can map ... Cheers Kevin Sent from an Android On 21 Jan 2012 02:02, "Jennifer Jackson" wrote: > Hi Greg, > > We have a tutorial workflow from one of our publications that would be a > good test case to use: > > http://usegalaxy.org

Re: [galaxy-user] question from a new Galaxy user

2012-03-09 Thread Kevin L
If I may add, I believe galaxy will uncompress your files if zipped. Unzipping a 13 GB file, will take a while. Kev ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegal

[galaxy-user] Fastq to Bam conversion on paired end reads picard

2012-10-21 Thread Kevin L
Hi I was trying to enter the 2nd fq file into the second dialog box for this tool but then the selection automatically changes to be the same as the filename in the first dialog. is this a known issue? NGS: Picard (beta) CONVERSION FASTQ to BAM

Re: [galaxy-user] Fastq to Bam conversion on paired end reads picard

2012-10-22 Thread Kevin L
unchanged (even when successful, e.g. no > errors found). > > Hopefully this helps, but if your question has been misunderstood, please > let us know, as we will probably need to examine your exact history/run > conditions. I did quickly run a small test to check for a UI problem an