Re: [galaxy-user] Asynchronous data source
Hi Dan! On 14 November 2011 11:42, Daniel Blankenberg wrote: > Can you try changeset 6267:7a72e5299fdc and see if that works for you? > Actually, I just got it to work now. It turns out that I really have to open the URL that Galaxy provides on the client side (i.e., in the browser). Thanks for looking into this though! Best Wishes, Joachim ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-user] Asynchronous data source
Hi Joachim, Can you try changeset 6267:7a72e5299fdc and see if that works for you? Thanks for using Galaxy, Dan On Nov 13, 2011, at 12:07 PM, Joachim Baran wrote: > Hello, again, > > On 2011-11-13, at 10:47 AM, Joachim Baran wrote: >> Does anyone know why Galaxy would not retrieve the data? Do I really have to >> show the HTML that is returned by Galaxy to make it work? > To follow up on my own email: it seems that the data is retrieved. I see > that files with the right contents are created in > galaxy-dist/database/files/000 > > So, what could be the reason that they do not show up in the web interface? > > Thanks, > Joachim > ___ > The Galaxy User list should be used for the discussion of > Galaxy analysis and other features on the public server > at usegalaxy.org. Please keep all replies on the list by > using "reply all" in your mail client. For discussion of > local Galaxy instances and the Galaxy source code, please > use the Galaxy Development list: > > http://lists.bx.psu.edu/listinfo/galaxy-dev > > To manage your subscriptions to this and other Galaxy lists, > please use the interface at: > > http://lists.bx.psu.edu/ ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-user] Asynchronous data source
Hello, again, On 2011-11-13, at 10:47 AM, Joachim Baran wrote: > Does anyone know why Galaxy would not retrieve the data? Do I really have to > show the HTML that is returned by Galaxy to make it work? To follow up on my own email: it seems that the data is retrieved. I see that files with the right contents are created in galaxy-dist/database/files/000 So, what could be the reason that they do not show up in the web interface? Thanks, Joachim ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
[galaxy-user] Asynchronous data source
Hello! I am adding support for Galaxy's asynchronous data sources to a server of mine, but I cannot get Galaxy to retrieve the actual data from it. So far, I have added a data source tool to my Galaxy installation which links out to my server. There I track the URL that is provided by Galaxy and later I use this URL to tell Galaxy that the data can be retrieved. At this point, Galaxy returns an HTML document to me, which says (excerpt): "[...] The following job has been successfully added to the queue: 1: testserver You can check the status of queued jobs and view the resulting data by refreshing the History pane. When the job has been run the status will change from 'running' to 'finished' if completed successfully or 'error' if problems were encountered. [...]" I just discard this HTML. When I then go back to my Galaxy server, nothing has happened. Even when I refresh, I do not see any job pending. Does anyone know why Galaxy would not retrieve the data? Do I really have to show the HTML that is returned by Galaxy to make it work? Thanks, Joachim ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
