[galaxy-user] Cucumber genome

2011-12-10 Thread changlong wen
Hi, In the NGS mapping option with "lastz" I cannot find the Cucumber genome.* *Could you please make this reference genome available? or we have the reference sequence. How to add them in the list? Many thanks. Have a good day. Best regards changlong

Re: [galaxy-user] Cucumber genome

2011-12-09 Thread Dannon Baker
Changlong, Lastz (and many other tools) allow you to select a reference from your history instead of picking one of Galaxy's built-in references. To do this, upload your reference and then when you run Lastz select "in your history" for the reference location, and pick your uploaded file as th

[galaxy-user] Cucumber genome

2011-12-09 Thread changlong wen
Hi, In the NGS mapping option with "lastz" I cannot find the Cucumber genome.* *Could you please make this reference genome available? Or we have the reference sequence. How to add them in in the local server? Many thanks. Have a good day. Best regards changlong _