Re: [galaxy-user] How to add a tool to Cloud Galaxy

2012-01-07 Thread Greg Edwards
Dannon, Thanks. I can't believe I didn;t see that, I've read the Cloud setup page a dozen times while getting familiar with Cloudman. I guess you skip what you don;t need at the time :=( Greg On Sat, Jan 7, 2012 at 11:20 PM, Dannon Baker wrote: > Hi Greg, > > In order to install custom tools y

Re: [galaxy-user] How to add a tool to Cloud Galaxy

2012-01-07 Thread Dannon Baker
Hi Greg, In order to install custom tools you'll need to SSH into a running instance, install your tool and make any modifications to Galaxy you need in order to use it, and then use the "Persist changes to file system" option in the Cloudman administration panel. By default, Cloudman discards

[galaxy-user] How to add a tool to Cloud Galaxy

2012-01-06 Thread Greg Edwards
Hi Folks, I could use some help on adding a tool to the cloud version of Galaxy. The Cloud startup process creates, among other things, /mnt/galaxyTools/galaxy-central which has tools_conf.xml, and subdir tools etc. This seems not accessible before starting the cloud. I assume I need to add my too