Hi Luce,
We can duplicate the missing link problem and are in the processing of
investigating/correcting.
Thank you for reporting the issue!
Jen
Galaxy team
On 12/11/12 5:36 AM, Lucy A. Skrabanek wrote:
Dear all,
For BED files, there used to be an option in the preview window to visualize
them in the UCSC Genome Browser, but that seems to have disappeared.
Specifically, from a TopHat/Cufflinks run, I used to be able to visualize the
accepted hits, the splice junctions and the assembled transcripts datasets in
the UCSC Genome browser by simply clicking on the 'display at UCSC' link. This
link is still available for the accepted hits dataset, but seems to have
disappeared for the other two datasets. I realize I can still visualize these
datasets by downloading them (although this seems somewhat less convenient). Is
the loss of this link to UCSC intentional?
Thanks,
luce
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